Publications since 2006

Popitsch, Niko; Bilusic, Ivana; Rescheneder, Philipp; Schroeder, Renée; Lybecker, Meghan (2017). Temperature-dependent sRNA transcriptome of the Lyme disease spirochete. BMC GENOMICS;18(1):28. PMID: 28056764
Sedlyarova, Nadezda; Rescheneder, Philipp; Magán, Andrés; Popitsch, Niko; Rziha, Natascha; Bilusic, Ivana; Epshtein, Vitaly; Zimmermann, Bob; Lybecker, Meghan; Sedlyarov, Vitaly; Schroeder, Renée; Nudler, Evgeny (2017). Natural RNA Polymerase Aptamers Regulate Transcription in E. coli. MOL CELL;67(1):30-43.e6. PMID: 28648779
Aronica, Lucia; Kasparek, Torben; Ruchman, David; Marquez, Yamile; Cipak, Lubos; Cipakova, Ingrid; Anrather, Dorothea; Mikolaskova, Barbora; Radtke, Maximilian; Sarkar, Sovan; Pai, Chen-Chun; Blaikley, Elizabeth; Walker, Carol; Shen, Kuo-Fang; Schroeder, Renee; Barta, Andrea; Forsburg, Susan L; Humphrey, Timothy C (2016). The spliceosome-associated protein Nrl1 suppresses homologous recombination-dependent R-loop formation in fission yeast. NUCLEIC ACIDS RES;44(4):1703-17.. PMID: 26682798
Le Rhun, Anaïs; Beer, Yan Yan; Reimegård, Johan; Chylinski, Krzysztof; Charpentier, Emmanuelle (2016). RNA sequencing uncovers antisense RNAs and novel small RNAs in Streptococcus pyogenes. RNA BIOL;13(2):177-95. PMID: 26580233
Zemora, Georgeta; Handl, Stefan; Waldsich, Christina (2016). Human telomerase reverse transcriptase binds to a pre-organized hTR in vivo exposing its template. NUCLEIC ACIDS RES;44(1):413-25.. PMID: 26481359
Adams, Philip P; Flores Avile, Carlos; Popitsch, Niko; Bilusic, Ivana; Schroeder, Renée; Lybecker, Meghan; Jewett, Mollie W (2016). In vivo expression technology and 5' end mapping of the Borrelia burgdorferi transcriptome identify novel RNAs expressed during mammalian infection. NUCLEIC ACIDS RES. PMID: 27913725
Sedlyarova, Nadezda; Shamovsky, Ilya; Bharati, Binod K; Epshtein, Vitaly; Chen, Jiandong; Gottesman, Susan; Schroeder, Renée; Nudler, Evgeny (2016). sRNA-Mediated Control of Transcription Termination in E. coli. CELL;167(1):111-121. PMID: 27662085
Weiss, Adam (2015). Lamarckian Illusions. Trends Ecol. Evol.;30(10):566-8. PMID: 26411613
Schroeder, Renée (2015). Soups & SELEX for the origin of life. RNA;21(4):729-32. PMID: 25780212
Lybecker, Meghan; Zimmermann, Bob; Bilusic, Ivana; Tukhtubaeva, Nadezda; Schroeder, Renée (2014). The double-stranded transcriptome of Escherichia coli. P NATL ACAD SCI USA;111(8):3134-9. PMID: 24453212
Mann, Martin; Kucharík, Marcel; Flamm, Christoph; Wolfinger, Michael T (2014). Memory-efficient RNA energy landscape exploration. BIOINFORMATICS;30(18):2584-91. PMID: 24833804
Bilusic, Ivana; Popitsch, Niko; Rescheneder, Philipp; Schroeder, Renée; Lybecker, Meghan (2014). Revisiting the coding potential of the E. coli genome through Hfq co-immunoprecipitation. RNA BIOL;11(5):641-654. PMID: 24922322
Lybecker, Meghan; Bilusic, Ivana; Raghavan, Rahul (2014). Pervasive transcription: detecting functional RNAs in bacteria. Transcription.;5(4):e944039. PMID: 25483405
Matylla-Kulinska, Katarzyna; Tafer, Hakim; Weiss, Adam; Schroeder, Renée (2014). Functional repeat-derived RNAs often originate from retrotransposon-propagated ncRNAs. Wiley Interdiscip Rev RNA;5(5):591-600. PMID: 25045147
Schroeder, Renée (2014). A special issue in memoriam of Carl Woese. RNA BIOL;11(3):169. PMID: 24736616
Martin Xaver, Lingzhi Huang, Doris Chen and Franz Klein (2013). Smc5/6-Mms21 prevents and eliminates inappropriate recombination intermediates in meiosis. PLOS GENET;9(12):e1004067. PMID: 24385936
Stampfl, Sabine; Doetsch, Martina; Beich-Frandsen, Mads; Schroeder, Renée (2013). Characterization of the kinetics of RNA annealing and strand displacement activities of the E. coli DEAD-box helicase CsdA. RNA BIOL;10(1):149-56. PMID: 23291905
Doetsch, Martina; Stampfl, Sabine; Fürtig, Boris; Beich-Frandsen, Mads; Saxena, Krishna; Lybecker, Meghan; Schroeder, Renée (2013). Study of E. coli Hfq's RNA annealing acceleration and duplex destabilization activities using substrates with different GC-contents. NUCLEIC ACIDS RES;41(1):487-97. PMID: 23104381
Matylla-Kulinska, Katarzyna; Boots, Jennifer L; Zimmermann, Bob; Schroeder, Renée (2012). Finding aptamers and small ribozymes in unexpected places. Wiley Interdiscip Rev RNA;1(3):73-91. PMID: 21853532
Doetsch, Martina; Schroeder, Renée; Fürtig, Boris (2011). Transient RNA-protein interactions in RNA folding. FEBS J;278(10):1634-42. PMID: 21410645