Publications since 2006

Wang, Huai-Chun; Minh, Bui Quang; Susko, Edward; Roger, Andrew J (2018). Modeling Site Heterogeneity with Posterior Mean Site Frequency Profiles Accelerates Accurate Phylogenomic Estimation. SYST BIOL;67(2):216-235. PMID: 28950365
Hoang, Diep Thi; Chernomor, Olga; von Haeseler, Arndt; Minh, Bui Quang; Le, Sy Vinh (2018). UFBoot2: Improving the Ultrafast Bootstrap Approximation. MOL BIOL EVOL;35(2):518-522. PMID: 29077904
Zaffagnini, Gabriele; Savova, Adriana; Danieli, Alberto; Romanov, Julia; Tremel, Shirley; Ebner, Michael; Peterbauer, Thomas; Sztacho, Martin; Trapannone, Riccardo; Tarafder, Abul K; Sachse, Carsten; Martens, Sascha (2018). p62 filaments capture and present ubiquitinated cargos for autophagy. EMBO J. PMID: 29343546
Tomanov, Konstantin; Nehlin, Lilian; Ziba, Ionida; Bachmair, Andreas (2018). SUMO chain formation relies on the amino-terminal region of SUMO-conjugating enzyme and has dedicated substrates in plants. BIOCHEM J;475(1):61-74. PMID: 29133528
Lee, Ha Yin; Itahana, Yoko; Schuechner, Stefan; Fukuda, Masahiro; Je, H Shawn; Ogris, Egon; Virshup, David M; Itahana, Koji (2018). Ca2+-dependent demethylation of phosphatase PP2Ac promotes glucose deprivation-induced cell death independently of inhibiting glycolysis. Sci Signal;11(512). PMID: 29317521
Hellerschmied, Doris; Roessler, Max; Lehner, Anita; Gazda, Linn; Stejskal, Karel; Imre, Richard; Mechtler, Karl; Dammermann, Alexander; Clausen, Tim (2018). UFD-2 is an adaptor-assisted E3 ligase targeting unfolded proteins. NAT COMMUN;9(1):484. PMID: 29396393
Orbán-Németh, Zsuzsanna; Beveridge, Rebecca; Hollenstein, David M; Rampler, Evelyn; Stranzl, Thomas; Hudecz, Otto; Doblmann, Johannes; Schlögelhofer, Peter; Mechtler, Karl (2018). Structural prediction of protein models using distance restraints derived from cross-linking mass spectrometry data. NAT PROTOC;13(3):478-494. PMID: 29419816
Fracchiolla, Dorotea; Martens, Sascha (2018). Sorting out "non-canonical" autophagy. EMBO J. PMID: 29431607
Weijler, Anna M; Schmidinger, Barbara; Kapiotis, Stylianos; Laggner, Hilde; Hermann, Marcela (2018). Oleic acid induces the novel apolipoprotein O and reduces mitochondrial membrane potential in chicken and human hepatoma cells. BIOCHIMIE. PMID: 29432786
Kurzbauer, Marie-Therese; Pradillo, Monica; Kerzendorfer, Claudia; Sims, Jason; Ladurner, Rene; Oliver, Cecilia; Janisiw, Michael Peter; Mosiolek, Magdalena; Schweizer, Dieter; Copenhaver, Gregory P; Schlogelhofer, Peter (2018). Arabidopsis thaliana FANCD2 Promotes Meiotic Crossover Formation. PLANT CELL. PMID: 29352063
Benke, Stefan; Agerer, Benedikt; Haas, Lisa; Stöger, Martin; Lercher, Alexander; Gabler, Lisa; Kiss, Izabella; Scinicariello, Sara; Berger, Walter; Bergthaler, Andreas; Obenauf, Anna C and Versteeg, Gijs A. (2018). Human tripartite motif protein 52 is required for cell context-dependent proliferation Oncotarget;17(9):13565-13581. PMID: 29568378
Hong, Ye; Sonneville, Remi; Wang, Bin; Scheidt, Viktor; Meier, Bettina; Woglar, Alexander; Demetriou, Sarah; Labib, Karim; Jantsch, Verena & Gartner, Anton (2018). LEM-3 is a midbody-tethered DNA nuclease that resolves chromatin bridges during late mitosis NAT COMMUN.
Nikolic, Nela; Bergmiller, Tobias; Vandervelde, Alexandra; Albanese, Tanino G; Gelens, Lendert; Moll, Isabella (2018). Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations. NUCLEIC ACIDS RES. PMID: 29432616
Durica-Mitic, Svetlana; Göpel, Yvonne; Görke, Boris (2018). Carbohydrate Utilization in Bacteria: Making the Most Out of Sugars with the Help of Small Regulatory RNAs. Microbiol Spectr;6(2). PMID: 29573258
Lučić, Iva; Rathinaswamy, Manoj K; Truebestein, Linda; Hamelin, David J; Burke, John E; Leonard, Thomas A (2018). Conformational sampling of membranes by Akt controls its activation and inactivation. P NATL ACAD SCI USA. PMID: 29632185
Kovarik, Pavel; Ebner, Florian; Sedlyarov, Vitaly (2017). Posttranscriptional regulation of cytokine expression. Cytokine.;89:21-26. PMID: 26586165
Agustinho, Daniel Paiva; de Oliveira, Marco Antônio; Tavares, Aldo Henrique; Derengowski, Lorena; Stolz, Valentina; Guilhelmelli, Fernanda; Mortari, Márcia Renata; Kuchler, Karl; Silva-Pereira, Ildinete (2017). Dectin-1 is required for miR155 upregulation in murine macrophages in response to Candida albicans. Virulence.;8(1):41-52. PMID: 27294852
Nogueira, Filomena; Istel, Fabian; Pereira, Leonel; Tscherner, Michael; Kuchler, Karl (2017). Immunological Identification of Fungal Species. Meth Mol Biol;1508:339-359. PMID: 27837515
Prakash, C. and A. von Haeseler (2017). An Enumerative Combinatorics Model for Fragmentation Patterns in RNA Sequencing Provides Insights into Non-uniformity of the Expected Fragment Starting Point and Coverage Profile. J COMPUT BIOL;24(3):200-212. PMID: 27661099
Temmel, Hannes; Müller, Christian; Sauert, Martina; Vesper, Oliver; Reiss, Ariela; Popow, Johannes; Martinez, Javier; Moll, Isabella (2017). The RNA ligase RtcB reverses MazF-induced ribosome heterogeneity in Escherichia coli. NUCLEIC ACIDS RES;8(45):4708-4721. PMID: 27789694