Publications since 2006

Märtens, Birgit; Hou, Linlin; Amman, Fabian; Wolfinger, Michael T; Evguenieva-Hackenberg, Elena; Bläsi, Udo (2017). The SmAP1/2 proteins of the crenarchaeon Sulfolobus solfataricus interact with the exosome and stimulate A-rich tailing of transcripts. NUCLEIC ACIDS RES;45(13):7938-7949. PMID: 28520934
Sonnleitner, Elisabeth; Prindl, Konstantin; Bläsi, Udo (2017). The Pseudomonas aeruginosa CrcZ RNA interferes with Hfq-mediated riboregulation. PLOS ONE;12(7):e0180887. PMID: 28686727
Birgit Märtens, Kundan Sharma, Henning Urlaub, Udo Bläsi (2017). The SmAP2 RNA binding motif in the 3 UTR affects mRNA stability in the crenarchaeum Sulfolobus solfataricus NUCLEIC ACIDS RES. PMID: 28911098
Muralidhar Tata, Fabian Amman, Vinay Pawar, Michael T. Wolfinger, Siegfried Weiss, Susanne Häussler, Udo Bläsi (2017). The Anaerobically Induced sRNA PaiI Affects Denitrification in Pseudomonas aeruginosa PA14 Front Microbiol.
Sonnleitner, Elisabeth; Wulf, Alexander; Campagne, Sébastien; Pei, Xue-Yuan; Wolfinger, Michael T; Forlani, Giada; Prindl, Konstantin; Abdou, Laetitia; Resch, Armin; Allain, Frederic H-T; Luisi, Ben F; Urlaub, Henning; Bläsi, Udo (2017). Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa. NUCLEIC ACIDS RES. PMID: 29244160
Tata, Muralidhar; Wolfinger, Michael T; Amman, Fabian; Roschanski, Nicole; Dötsch, Andreas; Sonnleitner, Elisabeth; Häussler, Susanne; Bläsi, Udo (2016). RNASeq Based Transcriptional Profiling of Pseudomonas aeruginosa PA14 after Short- and Long-Term Anoxic Cultivation in Synthetic Cystic Fibrosis Sputum Medium. PLOS ONE;11(1):e0147811. PMID: 26821182
Pusic, Petra; Tata, Muralidhar; Wolfinger, Michael T; Sonnleitner, Elisabeth; Häussler, Susanne; Bläsi, Udo (2016). Cross-regulation by CrcZ RNA controls anoxic biofilm formation in Pseudomonas aeruginosa. Scientific reports.;6:39621. PMID: 28000785
Märtens, Birgit; Bezerra, Gustavo Arruda; Kreuter, Mathias Josef; Grishkovskaya, Irina; Manica, Andrea; Arkhipova, Valentina; Djinovic-Carugo, Kristina; Bläsi, Udo (2015). The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets. Life.;5(2):1264-81. PMID: 25905548
Arkhipova, Valentina; Stolboushkina, Elena; Kravchenko, Olesya; Kljashtorny, Vladislav; Gabdulkhakov, Azat; Garber, Maria; Nikonov, Stanislav; Märtens, Birgit; Bläsi, Udo; Nikonov, Oleg (2015). Binding of the 5'-Triphosphate End of mRNA to the γ-Subunit of Translation Initiation Factor 2 of the Crenarchaeon Sulfolobussolfataricus. J MOL BIOL;427(19):3086-95. PMID: 26244522
Märtens, Birgit; Manoharadas, Salim; Hasenöhrl, David; Zeichen, Lukas; Bläsi, Udo (2014). Back to translation: removal of aIF2 from the 5'-end of mRNAs by translation recovery factor in the crenarchaeon Sulfolobus solfataricus. NUCLEIC ACIDS RES. PMID: 24271401
Hämmerle, Hermann; Amman, Fabian; Ve?erek, Branislav; Stülke, Jörg; Hofacker, Ivo; Bläsi, Udo (2014). Impact of Hfq on the Bacillus subtilis transcriptome. PLOS ONE;9(6):e98661. PMID: 24932523
Sonnleitner, Elisabeth; Bläsi, Udo (2014). Regulation of Hfq by the RNA CrcZ in Pseudomonas aeruginosa carbon catabolite repression. PLOS GENET;10(6):e1004440. PMID: 24945892
Ceyssens, Pieter-Jan; Minakhin, Leonid; Van den Bossche, An; Yakunina, Maria; Klimuk, Evgeny; Blasdel, Bob; De Smet, Jeroen; Noben, Jean-Paul; Bläsi, Udo; Severinov, Konstantin; Lavigne, Rob (2014). Development of giant bacteriophage ϕKZ is independent of the host transcription apparatus. J VIROL;88(18):10501-10. PMID: 24965474
Kaberdin V., Bläsi U. (2014). mRNA Stability eLS. John Wiley & Sons Ltd, Chichester.
Kaberdin, Vladimir R; Bläsi, Udo (2013). Bacterial helicases in post-transcriptional control. BBA-GENE REGUL MECH;1829(8):878-83. PMID: 23291566
Evguenieva-Hackenberg, Elena; Bläsi, Udo (2013). Attack from both ends: mRNA degradation in the crenarchaeon Sulfolobus solfataricus. BIOCHEM SOC T;41(1):379-83. PMID: 23356315
La Teana, Anna; Benelli, Dario; Londei, Paola; Bläsi, Udo (2013). Translation initiation in the crenarchaeon Sulfolobus solfataricus: eukaryotic features but bacterial route. BIOCHEM SOC T;41(1):350-5. PMID: 23356310
Märtens, Birgit; Manoharadas, Salim; Hasenöhrl, David; Manica, Andrea; Bläsi, Udo (2013). Antisense regulation by transposon-derived RNAs in the hyperthermophilic archaeon Sulfolobus solfataricus. EMBO REP(14):527 - 533. PMID: 23579342
Milojevic, Tetyana; Grishkovskaya, Irina; Sonnleitner, Elisabeth; Djinovic-Carugo, Kristina; Bläsi, Udo (2013). The Pseudomonas aeruginosa Catabolite Repression Control Protein Crc Is Devoid of RNA Binding Activity. PLOS ONE;8(5):e64609. PMID: 23717639
Milojevic, Tetyana; Sonnleitner, Elisabeth; Romeo, Alessandra; Djinovic-Carugo, Kristina; Bläsi, Udo (2013). False positive RNA binding activities after Ni-affinity purification from Escherichia coli. RNA BIOL;10(6):1066-9. PMID: 23770724