Publications since 2006

Märtens, Birgit; Hou, Linlin; Amman, Fabian; Wolfinger, Michael T; Evguenieva-Hackenberg, Elena; Bläsi, Udo (2017). The SmAP1/2 proteins of the crenarchaeon Sulfolobus solfataricus interact with the exosome and stimulate A-rich tailing of transcripts. NUCLEIC ACIDS RES;45(13):7938-7949. PMID: 28520934
Sonnleitner, Elisabeth; Prindl, Konstantin; Bläsi, Udo (2017). The Pseudomonas aeruginosa CrcZ RNA interferes with Hfq-mediated riboregulation. PLOS ONE;12(7):e0180887. PMID: 28686727
Birgit Märtens, Kundan Sharma, Henning Urlaub, Udo Bläsi (2017). The SmAP2 RNA binding motif in the 3 UTR affects mRNA stability in the crenarchaeum Sulfolobus solfataricus NUCLEIC ACIDS RES.
Tata, Muralidhar; Wolfinger, Michael T; Amman, Fabian; Roschanski, Nicole; Dötsch, Andreas; Sonnleitner, Elisabeth; Häussler, Susanne; Bläsi, Udo (2016). RNASeq Based Transcriptional Profiling of Pseudomonas aeruginosa PA14 after Short- and Long-Term Anoxic Cultivation in Synthetic Cystic Fibrosis Sputum Medium. PLOS ONE;11(1):e0147811. PMID: 26821182
Pusic, Petra; Tata, Muralidhar; Wolfinger, Michael T; Sonnleitner, Elisabeth; Häussler, Susanne; Bläsi, Udo (2016). Cross-regulation by CrcZ RNA controls anoxic biofilm formation in Pseudomonas aeruginosa. Scientific reports.;6:39621. PMID: 28000785
Märtens, Birgit; Bezerra, Gustavo Arruda; Kreuter, Mathias Josef; Grishkovskaya, Irina; Manica, Andrea; Arkhipova, Valentina; Djinovic-Carugo, Kristina; Bläsi, Udo (2015). The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets. Life.;5(2):1264-81. PMID: 25905548
Arkhipova, Valentina; Stolboushkina, Elena; Kravchenko, Olesya; Kljashtorny, Vladislav; Gabdulkhakov, Azat; Garber, Maria; Nikonov, Stanislav; Märtens, Birgit; Bläsi, Udo; Nikonov, Oleg (2015). Binding of the 5'-Triphosphate End of mRNA to the γ-Subunit of Translation Initiation Factor 2 of the Crenarchaeon Sulfolobussolfataricus. J MOL BIOL;427(19):3086-95. PMID: 26244522
Märtens, Birgit; Manoharadas, Salim; Hasenöhrl, David; Zeichen, Lukas; Bläsi, Udo (2014). Back to translation: removal of aIF2 from the 5'-end of mRNAs by translation recovery factor in the crenarchaeon Sulfolobus solfataricus. NUCLEIC ACIDS RES. PMID: 24271401
Hämmerle, Hermann; Amman, Fabian; Ve?erek, Branislav; Stülke, Jörg; Hofacker, Ivo; Bläsi, Udo (2014). Impact of Hfq on the Bacillus subtilis transcriptome. PLOS ONE;9(6):e98661. PMID: 24932523
Sonnleitner, Elisabeth; Bläsi, Udo (2014). Regulation of Hfq by the RNA CrcZ in Pseudomonas aeruginosa carbon catabolite repression. PLOS GENET;10(6):e1004440. PMID: 24945892
Ceyssens, Pieter-Jan; Minakhin, Leonid; Van den Bossche, An; Yakunina, Maria; Klimuk, Evgeny; Blasdel, Bob; De Smet, Jeroen; Noben, Jean-Paul; Bläsi, Udo; Severinov, Konstantin; Lavigne, Rob (2014). Development of giant bacteriophage ϕKZ is independent of the host transcription apparatus. J VIROL;88(18):10501-10. PMID: 24965474
Kaberdin V., Bläsi U. (2014). mRNA Stability eLS. John Wiley & Sons Ltd, Chichester.
Kaberdin, Vladimir R; Bläsi, Udo (2013). Bacterial helicases in post-transcriptional control. BBA-GENE REGUL MECH;1829(8):878-83. PMID: 23291566
Evguenieva-Hackenberg, Elena; Bläsi, Udo (2013). Attack from both ends: mRNA degradation in the crenarchaeon Sulfolobus solfataricus. BIOCHEM SOC T;41(1):379-83. PMID: 23356315
La Teana, Anna; Benelli, Dario; Londei, Paola; Bläsi, Udo (2013). Translation initiation in the crenarchaeon Sulfolobus solfataricus: eukaryotic features but bacterial route. BIOCHEM SOC T;41(1):350-5. PMID: 23356310
Märtens, Birgit; Manoharadas, Salim; Hasenöhrl, David; Manica, Andrea; Bläsi, Udo (2013). Antisense regulation by transposon-derived RNAs in the hyperthermophilic archaeon Sulfolobus solfataricus. EMBO REP(14):527 - 533. PMID: 23579342
Milojevic, Tetyana; Grishkovskaya, Irina; Sonnleitner, Elisabeth; Djinovic-Carugo, Kristina; Bläsi, Udo (2013). The Pseudomonas aeruginosa Catabolite Repression Control Protein Crc Is Devoid of RNA Binding Activity. PLOS ONE;8(5):e64609. PMID: 23717639
Milojevic, Tetyana; Sonnleitner, Elisabeth; Romeo, Alessandra; Djinovic-Carugo, Kristina; Bläsi, Udo (2013). False positive RNA binding activities after Ni-affinity purification from Escherichia coli. RNA BIOL;10(6):1066-9. PMID: 23770724
Märtens, Birgit; Amman, Fabian; Manoharadas, Salim; Zeichen, Lukas; Orell, Alvaro; Albers, Sonja-Verena; Hofacker, Ivo; Bläsi, Udo (2013). Alterations of the Transcriptome of Sulfolobus acidocaldarius by Exoribonuclease aCPSF2. PLOS ONE;8(10):e76569. PMID: 24116119
Hämmerle, Hermann; Ve?erek, Branislav; Resch, Armin; Bläsi, Udo (2013). Duplex formation between the sRNA DsrA and rpoS mRNA is not sufficient for efficient RpoS synthesis at low temperature. RNA BIOL;10(12):1834-41. PMID: 24448230